510 research outputs found

    Aerodynamic and Stability Optimisation of Non-Planar Wings

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    Inferring a Transcriptional Regulatory Network from Gene Expression Data Using Nonlinear Manifold Embedding

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    Transcriptional networks consist of multiple regulatory layers corresponding to the activity of global regulators, specialized repressors and activators of transcription as well as proteins and enzymes shaping the DNA template. Such intrinsic multi-dimensionality makes uncovering connectivity patterns difficult and unreliable and it calls for adoption of methodologies commensurate with the underlying organization of the data source. Here we present a new computational method that predicts interactions between transcription factors and target genes using a compendium of microarray gene expression data and the knowledge of known interactions between genes and transcription factors. The proposed method called Kernel Embedding of REgulatory Networks (KEREN) is based on the concept of gene-regulon association and it captures hidden geometric patterns of the network via manifold embedding. We applied KEREN to reconstruct gene regulatory interactions in the model bacteria E.coli on a genome-wide scale. Our method not only yields accurate prediction of verifiable interactions, which outperforms on certain metrics comparable methodologies, but also demonstrates the utility of a geometric approach to the analysis of high-dimensional biological data. We also describe the general application of kernel embedding techniques to some other function and network discovery algorithms

    Electrohydrodynamic Methods for Fluid Flow Control

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    Control of flow separation on a contour bump by jets in a Mach 1.9 free-stream: an experimental study

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    Flow separation control over a three-dimensional contour bump using jet in a Mach 1.9 supersonic free-stream has been experimentally investigated using a transonic/supersonic wind tunnel. Jet total pressure in the range of 0–4 bar was blowing at the valley of the contour bump. Schlieren photography, surface oil flow visualisation and particle image velocimetry measurements were employed for flow visualisation and diagnostics. Experimental results show that blowing jet at the valley of the contour bump can hinder the formation and distort the spanwise vortices. The blowing jet can also reduce the extent of flow separation appears downstream of the bump crest. It was observed that this approach of flow control is more effective when high jet total pressure is employed. It is believed that a pressure gradient is generated as a result of the interaction between the flow downstream of the bump crest and the jet induced shock leads to the downwards flow motion around the bump valley

    Shock wave diffraction phenomena around slotted splitters

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    In the field of aerospace engineering, the study of the characteristics of vortical flows and their unsteady phenomena finds numerous engineering applications related to improvements in the design of tip devices, enhancement of combustor performance, and control of noise generation. A large amount of work has been carried out in the analysis of the shock wave diffraction around conventional geometries such as sharp and rounded corners, but the employment of splitters with lateral variation has hardly attracted the attention of researchers. The investigation of this phenomenon around two-dimensional wedges has allowed the understanding of the basic physical principles of the flow features. On the other hand, important aspects that appear in the third dimension due to the turbulent nature of the vortices are omitted. The lack of studies that use three-dimensional geometries has motivated the current work to experimentally investigate the evolution of the shock wave diffraction around two splitters with spike-shaped structures for Mach numbers of 1.31 and 1.59. Schlieren photography was used to obtain an insight into the sequential diffraction processes that take place in different planes. Interacting among them, these phenomena generate a complicated turbulent cloud with a vortical arrangement
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